THE STUDY OF X CHROMOSOME INACTIVATION IN MENTAL RETARDATION: COMPARATIVE ANALYSIS OF MOLECULAR-CYTOGENETIC AND POLYMERASE CHAIN REACTION-BASED TECHNIQUES IN RETT SYNDROME
Iourov IY1, Vorsanova SG2,*, Villard L3, Kolotii AD2, Yurov YB1,*
*Corresponding Author: Professor Yuri B. Yurov and Professor Svetlana G. Vorsanova, Cytogenetic Labora¬tory National Center of Mental Health, Russian Academy of Medical Sciences, Zagorodnoe shosse 2, Moscow 113 152, Russia; Tel.: +7-095-952-89-90; Fax: +7-095-952-89-40; E-mail: y_yurov@hotmail.com; y_yurov@yahoo. com
page: 33

RESULTS

Thirty-three samples of peripheric blood lymphocytes, obtained from RTT girls and their parents, were analyzed by FISH with chromosome X-specific alphoid probe (pYAM10-40). In cells of eight RTT girls (24.2%) homol­ogous highly heteromorphic chromosomes X were found. In metaphase and interphase, one X chromosome had large or medium hybridization signals and the other chromo­some contained a very small hybridization signal (Fig. 1) This provided us with the possibility to accurately mark and differentiate the parental chromosome X. Chromo­somal preparations of an RTT girl’s parents were analyzed to determine the paternal or maternal origin of chromo­some X with alphoid DNA heteromorphism. Five girls had X chromosomes with small centromeric heteromorphism of paternal origin and three of maternal origin. The data of molecular-cytogenetic assays are shown in Table 1. Ac­cording to the molecular-cytogenetic study, one girl had random X-inactivation (55:45), four girls had moderate X-inactivation (from 63:37 to 74:26), and three girls had extremely skewed X-inactivation (more than 80:20).

We have performed a PCR-based methylation sensi­tive method for determining X-inactivation skewing on peripheric blood lymphocytes of the eight RTT girls. The results of HpaII digestion and PCR are presented in Fig. 2.

The data obtained and comparison of the two methods applied are presented in Table 1. There is good correlation of the results obtained by these two independent methods for X-inactivation analysis. Using molecucular-cyto­genetic and replication pattern analysis of active/inactive X chromosomes, we have found that active X chromo­somes have paternal origin in seven cases and maternal in one case of RTT girls (Table 1).

 

Table 1. Comparison of the results obtained by two X-inactivation assays (PCR-based and FISH methods) in eight patients with Rett syndrome.

 

 

Patient

 

MECP2

Mutation

 

PCR

Results

 

FISH

Results

 

Status of

X-Inactivation

 

Chromosome X

Active/Inactive Origin

 

1

 

T197M

 

51:49

 

55:45

 

random

 

maternal:paternal

 

2

 

R255X

 

76:24

 

74:26

 

moderately skewed

 

paternal:maternal

 

3

 

T158M

 

69:31

 

62:38

 

moderately skewed

 

paternal:maternal

 

4

 

no mutation

 

85:15

 

82:18

 

extremely skewed

 

paternal:maternal

 

5

 

R168M

 

90:10

 

91:9

 

extremely skewed

 

paternal:maternal

 

6

 

no mutation

 

60:40

 

64:36

 

moderately skewed

 

paternal:maternal

 

7

 

P388T

 

95:5

 

91:9

 

extremely skewed

 

paternal:maternal

 

8

 

no mutation

 

61:39

 

69:31

 

moderately skewed

 

paternal:maternal

 




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